common/images/hub-jupyter/Dockerfile

# Base Image

# Not using this one since it only provides python3.7. This has been a
# long standing issue.
#
#FROM pytorch/pytorch:1.12.1-cuda11.3-cudnn8-runtime
FROM pytorchlightning/pytorch_lightning:base-cuda-py3.9-torch1.12-cuda11.6.1

# pytorch base provides the packages:
#
#   python3, python3-pip
#
# and
#
#  torch, torchvision

# Some python-packages need mysql-config,
# which is provided by libmysqlclient-dev

ARG NB_USER="jovyan"


USER root
ENV DEBIAN_FRONTEND=noninteractive
RUN apt-get update && apt-get install -y \
		g++ \
		sudo \
		bash \
		curl \
		libmysqlclient-dev \
		zip \
		libc6 \
		&&\
	ln --force --symbolic /usr/bin/python3 /usr/bin/python &&\
	pip3 install \
		pylint \
		colored \
		requests        \
		python-dateutil \
		cloudpickle     \
		pickleshare     \
		packaging       \
		h5py            \
		matplotlib \
		seaborn \
		scikit-learn \
		scipy \
		tqdm \
		networkx \
		gym       \
		pattern   \
		imageio \
		opt-einsum \
		einops \
		torchinfo \
		torchaudio \
		torchtext \
		torchmetrics \
		torch-geometric \
		torchviz \
		tensorboard
RUN pip3 install \
		jupyterlab \
		ipywidgets &&\
	curl -fsSL https://deb.nodesource.com/setup_16.x | bash - &&\
	apt-get install -y nodejs &&\
	jupyter labextension install @jupyter-widgets/jupyterlab-manager &&\
	jupyter nbextension enable --py widgetsnbextension
RUN useradd \
		--create-home \
		--password "hashlife" \
		--shell /usr/bin/bash \
		--user-group \
		--groups sudo \
		$NB_USER &&\
	echo "$NB_USER:hashlife" | chpasswd  &&\
	mkdir -p /data &&\
	chown $NB_USER /data

COPY --chown=$NB_USER jupyter_notebook_config.py /home/$NB_USER/.jupyter/

USER $NB_USER
WORKDIR /data
#ENV LD_LIBRARY_PATH /usr/local/cuda-10.1/compat:$LD_LIBRARY_PATH
CMD ["jupyter", "lab", \
		"--ip=0.0.0.0", \
		"--LabApp.token=''", \
		"--ContentsManager.allow_hidden=True"]