diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..9ea0f13 --- /dev/null +++ b/.gitignore @@ -0,0 +1,2 @@ +.* +!.gitignore diff --git a/home/spacemacs b/home/spacemacs index 537be9c..2621240 100644 --- a/home/spacemacs +++ b/home/spacemacs @@ -43,7 +43,7 @@ This function should only modify configuration layer settings." helm lsp multiple-cursors - ;; org + org (shell :variables shell-default-height 30 shell-default-position 'bottom) @@ -56,7 +56,7 @@ This function should only modify configuration layer settings." ;; Systems and interfaces docker - git + ;git version-control unicode-fonts @@ -65,16 +65,16 @@ This function should only modify configuration layer settings." bibtex (latex :variables latex-enable-folding t - latex-enable-auto-fill t - latex-enable-magic t) + latex-enable-magic t + ) markdown yaml shell-scripts (python :variables python-shell-interpreter "~/common/scr/python.sh" python-shell-interpreter-args "-m IPython --simple-prompt -i") - (ocaml :variables - ocaml-format-on-save t) + ;(ocaml :variables + ; ocaml-format-on-save t) (c-c++ :variables c-c++-adopt-subprojects t @@ -91,6 +91,8 @@ This function should only modify configuration layer settings." html alda ;; Music language + + ;; Others finance ;; Ledger accounting nginx systemd @@ -116,14 +118,14 @@ This function should only modify configuration layer settings." smart-tabs-mode tablist exec-path-from-shell - merlin ) ;; A list of packages that cannot be updated. dotspacemacs-frozen-packages '() ;; A list of packages that will not be installed and loaded. - dotspacemacs-excluded-packages '() + ;; Exclude orgit to fix mode problem in PDFView + dotspacemacs-excluded-packages '(orgit) ;; Defines the behaviour of Spacemacs when installing packages. ;; Possible values are `used-only', `used-but-keep-unused' and `all'. @@ -589,13 +591,15 @@ before packages are loaded." (exec-path-from-shell-initialize) ;; Key Bindings - (global-set-key (kbd "") 'centaur-tabs-backward) - (global-set-key (kbd "") 'centaur-tabs-forward) - (global-set-key (kbd "C-") 'centaur-tabs-move-current-tab-to-right) - (global-set-key (kbd "C-") 'centaur-tabs-move-current-tab-to-left) (evil-ex-define-cmd "q" 'kill-this-buffer) (evil-ex-define-cmd "quit" 'evil-quit) + (setq centaur-tabs-style "wave") + + ;; Ensures the pdf view mode doesn't get into emacs state, which will destroy + ;; the key bindings + ;(evil-set-initial-state 'pdf-view-mode 'normal) + ;; Displaying whitespaces (spacemacs/toggle-whitespace-globally-on) (setq whitespace-display-mappings @@ -662,8 +666,6 @@ before packages are loaded." 'java 'javascript) (add-hook 'after-init-hook #'company-statistics-mode) - (add-hook 'text-mode-hook #'origami-mode) - (add-hook 'prog-mode-hook #'origami-mode) (add-hook 'text-mode-hook #'display-fill-column-indicator-mode) (add-hook 'prog-mode-hook #'display-fill-column-indicator-mode) (add-hook 'LaTeX-mode-hook @@ -675,12 +677,12 @@ before packages are loaded." :background nil :slant 'italic) - (setq opam-share (substring (shell-command-to-string - "opam config var share 2> /dev/null") 0 -1)) - (add-to-list 'load-path (concat opam-share "/emacs/site-lisp")) + ;;(setq opam-share (substring (shell-command-to-string + ;; "opam config var share 2> /dev/null") 0 -1)) + ;;(add-to-list 'load-path (concat opam-share "/emacs/site-lisp")) ;;(with-eval-after-load 'merlin ;; (setq merlin-command 'opam)) - (require 'merlin) + ;;(require 'merlin) ;; Prevent creation of lockfiles for angular (setq create-lockfiles nil) @@ -691,23 +693,37 @@ before packages are loaded." (defun dotspacemacs/emacs-custom-settings () "Emacs custom settings. This is an auto-generated function, do not modify its content directly, use -Emacs customize menu instead +Emacs customize menu instead. This function is called at the very end of Spacemacs initialization." (custom-set-variables ;; custom-set-variables was added by Custom. ;; If you edit it by hand, you could mess it up, so be careful. ;; Your init file should contain only one such instance. ;; If there is more than one, they won't work right. - '(evil-want-Y-yank-to-eol nil) + ;'(evil-want-Y-yank-to-eol nil) '(helm-completion-style 'emacs) '(package-selected-packages -'(magic-latex-buffer unicode-fonts ucs-utils font-utils persistent-soft pcache git-gutter-fringe+ fringe-helper git-gutter+ dockerfile-mode docker docker-tramp browse-at-remote xterm-color vterm terminal-here smart-tabs-mode shell-pop multi-term eshell-z eshell-prompt-extras esh-help company-web web-completion-data centaur-tabs yaml-mode yasnippet-snippets lsp-ui lsp-python-ms lsp-pyright lsp-origami origami lsp-latex helm-lsp helm-company helm-c-yasnippet fuzzy flycheck-ycmd flycheck-rtags flycheck-pos-tip pos-tip flycheck-ocaml dap-mode lsp-treemacs bui treemacs cfrs pfuture posframe company-ycmd company-rtags company-reftex company-math company-c-headers company-auctex company-anaconda ccls lsp-mode ht dash-functional auto-yasnippet yasnippet ac-ispell auto-complete neotree insert-shebang helm-gtags ggtags flycheck-bashate fish-mode counsel-gtags counsel swiper company-shell company ycmd request-deferred yapfify sphinx-doc pytest pyenv-mode py-isort poetry pippel pipenv pyvenv pip-requirements org-ref pdf-tools key-chord ivy htmlize tablist mmm-mode math-symbol-lists markdown-toc live-py-mode importmagic epc ctable concurrent deferred helm-rtags rtags helm-pydoc helm-bibtex bibtex-completion biblio parsebib biblio-core google-c-style gh-md disaster cython-mode cpp-auto-include blacken auctex anaconda-mode pythonic utop tuareg caml treemacs-magit smeargle ocp-indent ocamlformat merlin-eldoc merlin magit-svn magit-section magit-gitflow magit-popup helm-gitignore helm-git-grep gitignore-templates gitignore-mode gitconfig-mode gitattributes-mode git-timemachine git-messenger git-link forge markdown-mode ghub closql emacsql-sqlite emacsql treepy evil-collection magit git-commit with-editor transient dune ws-butler writeroom-mode winum which-key volatile-highlights vi-tilde-fringe uuidgen use-package undo-tree treemacs-projectile treemacs-persp treemacs-icons-dired treemacs-evil toc-org symon symbol-overlay string-inflection spaceline-all-the-icons restart-emacs request rainbow-delimiters popwin pcre2el password-generator paradox overseer org-superstar open-junk-file nameless move-text macrostep lorem-ipsum link-hint indent-guide hybrid-mode hungry-delete hl-todo highlight-parentheses highlight-numbers highlight-indentation helm-xref helm-themes helm-swoop helm-purpose helm-projectile helm-org helm-mode-manager helm-make helm-ls-git helm-flx helm-descbinds helm-ag google-translate golden-ratio font-lock+ flycheck-package flycheck-elsa flx-ido fancy-battery eyebrowse expand-region evil-visualstar evil-visual-mark-mode evil-unimpaired evil-tutor evil-textobj-line evil-surround evil-numbers evil-nerd-commenter evil-mc evil-matchit evil-lisp-state evil-lion evil-indent-plus evil-iedit-state evil-goggles evil-exchange evil-escape evil-ediff evil-easymotion evil-cleverparens evil-args evil-anzu eval-sexp-fu emr elisp-slime-nav editorconfig dumb-jump dotenv-mode dired-quick-sort diminish devdocs define-word column-enforce-mode clean-aindent-mode centered-cursor-mode auto-highlight-symbol auto-compile aggressive-indent ace-link ace-jump-helm-line)) + '(yasnippet-snippets yapfify yaml-mode xterm-color ws-butler writeroom-mode winum which-key web-mode web-beautify vterm volatile-highlights vi-tilde-fringe uuidgen use-package unicode-fonts undo-tree toc-org tide terminal-here tagedit systemd symon symbol-overlay sql-indent sphinx-doc spaceline-all-the-icons smeargle smart-tabs-mode slim-mode shell-pop scss-mode sass-mode restart-emacs rainbow-delimiters pytest pyenv-mode py-isort pug-mode prettier-js popwin poetry pippel pipenv pip-requirements persp-mode pdf-tools pcre2el password-generator paradox overseer org-superstar org-ref opencl-mode open-junk-file nodejs-repl nginx-mode neotree nameless multi-term move-text mmm-mode markdown-toc magic-latex-buffer macrostep lsp-ui lsp-python-ms lsp-pyright lsp-origami lsp-latex lorem-ipsum livid-mode live-py-mode link-hint json-reformat json-navigator js2-refactor js-doc insert-shebang indent-guide importmagic impatient-mode hybrid-mode hungry-delete hl-todo highlight-parentheses highlight-numbers highlight-indentation highlight-doxygen helm-xref helm-themes helm-swoop helm-rtags helm-pydoc helm-purpose helm-projectile helm-org helm-mode-manager helm-make helm-lsp helm-flx helm-descbinds helm-ctest helm-css-scss helm-company helm-c-yasnippet helm-bibtex helm-ag google-translate google-c-style golden-ratio glsl-mode gh-md fuzzy forge font-lock+ flycheck-ycmd flycheck-rtags flycheck-pos-tip flycheck-package flycheck-ledger flycheck-elsa flycheck-bashate flx-ido fish-mode fancy-battery eyebrowse expand-region exec-path-from-shell evil-visualstar evil-visual-mark-mode evil-unimpaired evil-tutor evil-textobj-line evil-surround evil-numbers evil-nerd-commenter evil-mc evil-matchit evil-lisp-state evil-lion evil-ledger evil-indent-plus evil-iedit-state evil-goggles evil-exchange evil-escape evil-ediff evil-easymotion evil-cleverparens evil-args evil-anzu eval-sexp-fu eshell-z eshell-prompt-extras esh-help emr emmet-mode elisp-slime-nav editorconfig dumb-jump dotenv-mode dockerfile-mode docker disaster dired-quick-sort diminish devdocs define-word cython-mode cuda-mode cpp-auto-include company-ycmd company-web company-shell company-rtags company-reftex company-math company-glsl company-c-headers company-auctex company-anaconda column-enforce-mode cmake-mode clean-aindent-mode centered-cursor-mode centaur-tabs ccls browse-at-remote blacken auto-yasnippet auto-highlight-symbol auto-compile auctex-latexmk alda-mode aggressive-indent ace-window ace-link ace-jump-helm-line ac-ispell)) + '(warning-suppress-types '((use-package))) '(whitespace-style - '(face trailing tabs spaces lines newline empty indentation space-after-tab space-before-tab space-mark tab-mark newline-mark))) + '(face trailing tabs spaces lines newline empty indentation space-after-tab space-before-tab space-mark tab-mark newline-mark))) +(custom-set-faces + ;; custom-set-faces was added by Custom. + ;; If you edit it by hand, you could mess it up, so be careful. + ;; Your init file should contain only one such instance. + ;; If there is more than one, they won't work right. + '(highlight-parentheses-highlight ((nil (:weight ultra-bold))) t)) +) +(custom-set-variables + ;; custom-set-variables was added by Custom. + ;; If you edit it by hand, you could mess it up, so be careful. + ;; Your init file should contain only one such instance. + ;; If there is more than one, they won't work right. + '(package-selected-packages + '(yapfify yaml-mode xterm-color ws-butler winum which-key web-mode web-beautify volatile-highlights vi-tilde-fringe uuidgen use-package undo-tree toc-org tide typescript-mode tagedit systemd sql-indent spaceline smeargle smart-tabs-mode slim-mode shell-pop scss-mode sass-mode restart-emacs rainbow-delimiters pyvenv pytest pyenv-mode py-isort pug-mode popwin pip-requirements persp-mode pcre2el paradox spinner orgit org-ref citeproc htmlize string-inflection queue org-plus-contrib org-bullets open-junk-file nginx-mode neotree multi-term move-text mmm-mode markdown-toc markdown-mode macrostep lorem-ipsum livid-mode skewer-mode simple-httpd live-py-mode linum-relative link-hint ledger-mode js2-refactor yasnippet multiple-cursors js2-mode js-doc insert-shebang indent-guide hydra lv hy-mode hungry-delete hl-todo highlight-parentheses highlight-numbers parent-mode highlight-indentation highlight-doxygen helm-themes helm-swoop helm-pydoc helm-projectile projectile helm-mode-manager helm-make request helm-flx helm-descbinds helm-css-scss helm-bibtex bibtex-completion parsebib helm-ag haml-mode google-translate golden-ratio with-editor gh-md flycheck-pos-tip pos-tip flycheck-ledger flycheck pkg-info epl flx-ido flx fish-mode fill-column-indicator fancy-battery eyebrowse expand-region exec-path-from-shell evil-visualstar evil-visual-mark-mode evil-unimpaired evil-tutor evil-surround evil-search-highlight-persist highlight evil-numbers evil-nerd-commenter evil-mc evil-matchit evil-lisp-state smartparens evil-indent-plus evil-iedit-state iedit evil-exchange evil-escape evil-ediff evil-args evil-anzu anzu evil goto-chg eval-sexp-fu eshell-z eshell-prompt-extras esh-help emmet-mode elisp-slime-nav dumb-jump dockerfile-mode docker transient tablist json-mode docker-tramp aio json-snatcher disaster diminish diff-hl define-word cython-mode company-statistics company column-enforce-mode coffee-mode cmake-mode clean-aindent-mode clang-format centaur-tabs powerline bind-map bind-key biblio biblio-core auto-highlight-symbol ht auto-compile packed compat auctex-latexmk auctex anaconda-mode pythonic f dash s all-the-icons aggressive-indent adaptive-wrap ace-window ace-link ace-jump-helm-line helm avy popup helm-core async))) (custom-set-faces ;; custom-set-faces was added by Custom. ;; If you edit it by hand, you could mess it up, so be careful. ;; Your init file should contain only one such instance. ;; If there is more than one, they won't work right. ) -) diff --git a/home/vimrc b/home/vimrc index a50dd08..fa648cc 100755 --- a/home/vimrc +++ b/home/vimrc @@ -118,39 +118,43 @@ if isdirectory(expand('~/.vim/bundle/Vundle.vim')) Plugin 'burnettk/vim-angular' " C-like - Plugin 'Valloric/YouCompleteMe' - Plugin 'jeaye/color_coded' - Plugin 'rdnetto/YCM-Generator' - Plugin 'Stochastica/formatGen' + if has('gui_running') + Plugin 'Valloric/YouCompleteMe' + Plugin 'jeaye/color_coded' + Plugin 'rdnetto/YCM-Generator' + Plugin 'Stochastica/formatGen' + endif call vundle#end() filetype plugin indent on - let g:ycm_autoclose_preview_window_after_completion = 1 - let g:ycm_autoclose_preview_window_after_insertion = 1 - "let g:ycm_server_python_interpreter="/usr/bin/python3" - "let g:ycm_python_binary_path="/usr/bin/python3" - let g:ycm_filetype_blacklist = { - \ 'text': 1 - \} - let g:color_coded_enabled = 1 - let g:color_coded_filetypes = ['h', 'hh', 'h++', 'hpp', - \'c', 'cc', 'c++', 'cpp', 'objc'] - let NERDTreeIgnore = ['\.pyc', '\.aux', '\.toc', '\.o', '\.fdb_latexmk', '\.fls'] - " Tex YouCompleteMe interface - if !exists('g:ycm_semantic_triggers') - let g:ycm_semantic_triggers = {} + if has('gui_running') + let g:ycm_autoclose_preview_window_after_completion = 1 + let g:ycm_autoclose_preview_window_after_insertion = 1 + "let g:ycm_server_python_interpreter="/usr/bin/python3" + "let g:ycm_python_binary_path="/usr/bin/python3" + let g:ycm_filetype_blacklist = { + \ 'text': 1 + \} + let g:color_coded_enabled = 1 + let g:color_coded_filetypes = ['h', 'hh', 'h++', 'hpp', + \'c', 'cc', 'c++', 'cpp', 'objc'] + let NERDTreeIgnore = ['\.pyc', '\.aux', '\.toc', '\.o', '\.fdb_latexmk', '\.fls'] + " Tex YouCompleteMe interface + if !exists('g:ycm_semantic_triggers') + let g:ycm_semantic_triggers = {} + endif + au VimEnter * let g:ycm_semantic_triggers.tex=g:vimtex#re#youcompleteme + + " Syntastic + let g:syntastic_mode_map = { 'passive_filetypes': ['tex'] } + + + " Conque + let g:ConqueTerm_Color = 2 " Always with colour + let g:ConqueTerm_CloseOnEnd = 1 " Close conque when program stops + let g:ConqueTerm_StartMessages = 0 " Display warning messages if Conque is configured incorrectly endif - au VimEnter * let g:ycm_semantic_triggers.tex=g:vimtex#re#youcompleteme - - " Syntastic - let g:syntastic_mode_map = { 'passive_filetypes': ['tex'] } - - - " Conque - let g:ConqueTerm_Color = 2 " Always with colour - let g:ConqueTerm_CloseOnEnd = 1 " Close conque when program stops - let g:ConqueTerm_StartMessages = 0 " Display warning messages if Conque is configured incorrectly " Airline let g:airline_powerline_fonts = 1 diff --git a/images/hub-jupyter-39/Dockerfile b/images/hub-jupyter-39/Dockerfile new file mode 100644 index 0000000..943538d --- /dev/null +++ b/images/hub-jupyter-39/Dockerfile @@ -0,0 +1,53 @@ +FROM nvidia/cuda:10.1-cudnn7-runtime-centos8 + +ARG NB_USER="jovyan" + +USER root +ENV DEBIAN_FRONTEND=noninteractive +RUN yum install -y \ + gcc gcc-c++ \ + nodejs \ + python3.9 \ + python39-devel \ + sudo \ + &&\ + curl https://copr.fedorainfracloud.org/coprs/vbatts/bazel/repo/epel-7/vbatts-bazel-epel-7.repo > /etc/yum.repos.d/vbatts-bazel-epel-7.repo &&\ + yum install -y bazel3 &&\ + ln --force --symbolic /usr/bin/python3 /usr/bin/python &&\ + pip3 install \ + jupyterlab \ + nodejs \ + pylint \ + pyro \ + torch \ + networkx \ + colored \ + ipywidgets \ + matplotlib \ + plotly \ + bokeh \ + seaborn \ + scikit-learn \ + scipy \ + tqdm \ + &&\ + jupyter labextension install @jupyter-widgets/jupyterlab-manager &&\ + adduser \ + --create-home \ + --password "hashlife" \ + --shell /usr/bin/bash \ + --user-group \ + --groups wheel \ + $NB_USER &&\ + echo "$NB_USER:hashlife" | chpasswd &&\ + mkdir -p /data &&\ + chown $NB_USER /data + + +COPY --chown=$NB_USER jupyter_notebook_config.py /home/$NB_USER/.jupyter/ + +USER $NB_USER +WORKDIR /data +#ENV LD_LIBRARY_PATH /usr/local/cuda-10.1/compat:$LD_LIBRARY_PATH +CMD ["jupyter", "lab", "--ContentsManager.allow_hidden=True"] + diff --git a/images/hub-jupyter-39/jupyter_notebook_config.py b/images/hub-jupyter-39/jupyter_notebook_config.py new file mode 100644 index 0000000..1a7d414 --- /dev/null +++ b/images/hub-jupyter-39/jupyter_notebook_config.py @@ -0,0 +1,879 @@ +# Configuration file for jupyter-notebook. + +#------------------------------------------------------------------------------ +# Application(SingletonConfigurable) configuration +#------------------------------------------------------------------------------ + +## This is an application. + +## The date format used by logging formatters for %(asctime)s +#c.Application.log_datefmt = '%Y-%m-%d %H:%M:%S' + +## The Logging format template +#c.Application.log_format = '[%(name)s]%(highlevel)s %(message)s' + +## Set the log level by value or name. +#c.Application.log_level = 30 + +#------------------------------------------------------------------------------ +# JupyterApp(Application) configuration +#------------------------------------------------------------------------------ + +## Base class for Jupyter applications + +## Answer yes to any prompts. +#c.JupyterApp.answer_yes = False + +## Full path of a config file. +#c.JupyterApp.config_file = '' + +## Specify a config file to load. +#c.JupyterApp.config_file_name = '' + +## Generate default config file. +#c.JupyterApp.generate_config = False + +#------------------------------------------------------------------------------ +# NotebookApp(JupyterApp) configuration +#------------------------------------------------------------------------------ + +## Set the Access-Control-Allow-Credentials: true header +#c.NotebookApp.allow_credentials = False + +## Set the Access-Control-Allow-Origin header +# +# Use '*' to allow any origin to access your server. +# +# Takes precedence over allow_origin_pat. +#c.NotebookApp.allow_origin = '' +c.NotebookApp.allow_origin = '*' + +## Use a regular expression for the Access-Control-Allow-Origin header +# +# Requests from an origin matching the expression will get replies with: +# +# Access-Control-Allow-Origin: origin +# +# where `origin` is the origin of the request. +# +# Ignored if allow_origin is set. +#c.NotebookApp.allow_origin_pat = '' + +## Allow password to be changed at login for the notebook server. +# +# While loggin in with a token, the notebook server UI will give the opportunity +# to the user to enter a new password at the same time that will replace the +# token login mechanism. +# +# This can be set to false to prevent changing password from the UI/API. +#c.NotebookApp.allow_password_change = True + +## Allow requests where the Host header doesn't point to a local server +# +# By default, requests get a 403 forbidden response if the 'Host' header shows +# that the browser thinks it's on a non-local domain. Setting this option to +# True disables this check. +# +# This protects against 'DNS rebinding' attacks, where a remote web server +# serves you a page and then changes its DNS to send later requests to a local +# IP, bypassing same-origin checks. +# +# Local IP addresses (such as 127.0.0.1 and ::1) are allowed as local, along +# with hostnames configured in local_hostnames. +#c.NotebookApp.allow_remote_access = False + +## Whether to allow the user to run the notebook as root. +#c.NotebookApp.allow_root = False + +## DEPRECATED use base_url +#c.NotebookApp.base_project_url = '/' + +## The base URL for the notebook server. +# +# Leading and trailing slashes can be omitted, and will automatically be added. +#c.NotebookApp.base_url = '/' + +## Specify what command to use to invoke a web browser when opening the notebook. +# If not specified, the default browser will be determined by the `webbrowser` +# standard library module, which allows setting of the BROWSER environment +# variable to override it. +#c.NotebookApp.browser = '' + +## The full path to an SSL/TLS certificate file. +#c.NotebookApp.certfile = '' + +## The full path to a certificate authority certificate for SSL/TLS client +# authentication. +#c.NotebookApp.client_ca = '' + +## The config manager class to use +#c.NotebookApp.config_manager_class = 'notebook.services.config.manager.ConfigManager' + +## The notebook manager class to use. +#c.NotebookApp.contents_manager_class = 'notebook.services.contents.largefilemanager.LargeFileManager' + +## Extra keyword arguments to pass to `set_secure_cookie`. See tornado's +# set_secure_cookie docs for details. +#c.NotebookApp.cookie_options = {} + +## The random bytes used to secure cookies. By default this is a new random +# number every time you start the Notebook. Set it to a value in a config file +# to enable logins to persist across server sessions. +# +# Note: Cookie secrets should be kept private, do not share config files with +# cookie_secret stored in plaintext (you can read the value from a file). +#c.NotebookApp.cookie_secret = b'' + +## The file where the cookie secret is stored. +#c.NotebookApp.cookie_secret_file = '' + +## Override URL shown to users. +# +# Replace actual URL, including protocol, address, port and base URL, with the +# given value when displaying URL to the users. Do not change the actual +# connection URL. If authentication token is enabled, the token is added to the +# custom URL automatically. +# +# This option is intended to be used when the URL to display to the user cannot +# be determined reliably by the Jupyter notebook server (proxified or +# containerized setups for example). +#c.NotebookApp.custom_display_url = '' + +## The default URL to redirect to from `/` +#c.NotebookApp.default_url = '/tree' + +## Disable cross-site-request-forgery protection +# +# Jupyter notebook 4.3.1 introduces protection from cross-site request +# forgeries, requiring API requests to either: +# +# - originate from pages served by this server (validated with XSRF cookie and +# token), or - authenticate with a token +# +# Some anonymous compute resources still desire the ability to run code, +# completely without authentication. These services can disable all +# authentication and security checks, with the full knowledge of what that +# implies. +#c.NotebookApp.disable_check_xsrf = False + +## Whether to enable MathJax for typesetting math/TeX +# +# MathJax is the javascript library Jupyter uses to render math/LaTeX. It is +# very large, so you may want to disable it if you have a slow internet +# connection, or for offline use of the notebook. +# +# When disabled, equations etc. will appear as their untransformed TeX source. +#c.NotebookApp.enable_mathjax = True + +## extra paths to look for Javascript notebook extensions +#c.NotebookApp.extra_nbextensions_path = [] + +## handlers that should be loaded at higher priority than the default services +#c.NotebookApp.extra_services = [] + +## Extra paths to search for serving static files. +# +# This allows adding javascript/css to be available from the notebook server +# machine, or overriding individual files in the IPython +#c.NotebookApp.extra_static_paths = [] + +## Extra paths to search for serving jinja templates. +# +# Can be used to override templates from notebook.templates. +#c.NotebookApp.extra_template_paths = [] + +## +#c.NotebookApp.file_to_run = '' + +## Extra keyword arguments to pass to `get_secure_cookie`. See tornado's +# get_secure_cookie docs for details. +#c.NotebookApp.get_secure_cookie_kwargs = {} + +## Deprecated: Use minified JS file or not, mainly use during dev to avoid JS +# recompilation +#c.NotebookApp.ignore_minified_js = False + +## (bytes/sec) Maximum rate at which stream output can be sent on iopub before +# they are limited. +#c.NotebookApp.iopub_data_rate_limit = 1000000 + +## (msgs/sec) Maximum rate at which messages can be sent on iopub before they are +# limited. +#c.NotebookApp.iopub_msg_rate_limit = 1000 + +## The IP address the notebook server will listen on. +#c.NotebookApp.ip = '*' +c.NotebookApp.ip = '0.0.0.0' + +## Supply extra arguments that will be passed to Jinja environment. +#c.NotebookApp.jinja_environment_options = {} + +## Extra variables to supply to jinja templates when rendering. +#c.NotebookApp.jinja_template_vars = {} + +## The kernel manager class to use. +#c.NotebookApp.kernel_manager_class = 'notebook.services.kernels.kernelmanager.MappingKernelManager' + +## The kernel spec manager class to use. Should be a subclass of +# `jupyter_client.kernelspec.KernelSpecManager`. +# +# The Api of KernelSpecManager is provisional and might change without warning +# between this version of Jupyter and the next stable one. +#c.NotebookApp.kernel_spec_manager_class = 'jupyter_client.kernelspec.KernelSpecManager' + +## The full path to a private key file for usage with SSL/TLS. +#c.NotebookApp.keyfile = '' + +## Hostnames to allow as local when allow_remote_access is False. +# +# Local IP addresses (such as 127.0.0.1 and ::1) are automatically accepted as +# local as well. +#c.NotebookApp.local_hostnames = ['localhost'] + +## The login handler class to use. +#c.NotebookApp.login_handler_class = 'notebook.auth.login.LoginHandler' + +## The logout handler class to use. +#c.NotebookApp.logout_handler_class = 'notebook.auth.logout.LogoutHandler' + +## The MathJax.js configuration file that is to be used. +#c.NotebookApp.mathjax_config = 'TeX-AMS-MML_HTMLorMML-full,Safe' + +## A custom url for MathJax.js. Should be in the form of a case-sensitive url to +# MathJax, for example: /static/components/MathJax/MathJax.js +#c.NotebookApp.mathjax_url = '' + +## Sets the maximum allowed size of the client request body, specified in the +# Content-Length request header field. If the size in a request exceeds the +# configured value, a malformed HTTP message is returned to the client. +# +# Note: max_body_size is applied even in streaming mode. +#c.NotebookApp.max_body_size = 536870912 + +## Gets or sets the maximum amount of memory, in bytes, that is allocated for +# use by the buffer manager. +#c.NotebookApp.max_buffer_size = 536870912 + +## Gets or sets a lower bound on the open file handles process resource limit. +# This may need to be increased if you run into an OSError: [Errno 24] Too many +# open files. This is not applicable when running on Windows. +#c.NotebookApp.min_open_files_limit = 4096 + +## Dict of Python modules to load as notebook server extensions.Entry values can +# be used to enable and disable the loading ofthe extensions. The extensions +# will be loaded in alphabetical order. +#c.NotebookApp.nbserver_extensions = {} + +## The directory to use for notebooks and kernels. +#c.NotebookApp.notebook_dir = '' + +## Whether to open in a browser after starting. The specific browser used is +# platform dependent and determined by the python standard library `webbrowser` +# module, unless it is overridden using the --browser (NotebookApp.browser) +# configuration option. +c.NotebookApp.open_browser = False + +## Hashed password to use for web authentication. +# +# To generate, type in a python/IPython shell: +# +# from notebook.auth import passwd; passwd() +# +# The string should be of the form type:salt:hashed-password. +#c.NotebookApp.password = '' + +## Forces users to use a password for the Notebook server. This is useful in a +# multi user environment, for instance when everybody in the LAN can access each +# other's machine through ssh. +# +# In such a case, server the notebook server on localhost is not secure since +# any user can connect to the notebook server via ssh. +#c.NotebookApp.password_required = False + +## The port the notebook server will listen on. +c.NotebookApp.port = 8888 + +## The number of additional ports to try if the specified port is not available. +#c.NotebookApp.port_retries = 50 + +## DISABLED: use %pylab or %matplotlib in the notebook to enable matplotlib. +#c.NotebookApp.pylab = 'disabled' + +## If True, display a button in the dashboard to quit (shutdown the notebook +# server). +#c.NotebookApp.quit_button = True + +## (sec) Time window used to check the message and data rate limits. +#c.NotebookApp.rate_limit_window = 3 + +## Reraise exceptions encountered loading server extensions? +#c.NotebookApp.reraise_server_extension_failures = False + +## DEPRECATED use the nbserver_extensions dict instead +#c.NotebookApp.server_extensions = [] + +## The session manager class to use. +#c.NotebookApp.session_manager_class = 'notebook.services.sessions.sessionmanager.SessionManager' + +## Shut down the server after N seconds with no kernels or terminals running and +# no activity. This can be used together with culling idle kernels +# (MappingKernelManager.cull_idle_timeout) to shutdown the notebook server when +# it's not in use. This is not precisely timed: it may shut down up to a minute +# later. 0 (the default) disables this automatic shutdown. +#c.NotebookApp.shutdown_no_activity_timeout = 0 + +## Supply SSL options for the tornado HTTPServer. See the tornado docs for +# details. +#c.NotebookApp.ssl_options = {} + +## Supply overrides for terminado. Currently only supports "shell_command". +#c.NotebookApp.terminado_settings = {} + +## Set to False to disable terminals. +# +# This does *not* make the notebook server more secure by itself. Anything the +# user can in a terminal, they can also do in a notebook. +# +# Terminals may also be automatically disabled if the terminado package is not +# available. +#c.NotebookApp.terminals_enabled = True + +## Token used for authenticating first-time connections to the server. +# +# When no password is enabled, the default is to generate a new, random token. +# +# Setting to an empty string disables authentication altogether, which is NOT +# RECOMMENDED. +#c.NotebookApp.token = '' +c.NotebookApp.token = '' + +## Supply overrides for the tornado.web.Application that the Jupyter notebook +# uses. +#c.NotebookApp.tornado_settings = {} + +## Whether to trust or not X-Scheme/X-Forwarded-Proto and X-Real-Ip/X-Forwarded- +# For headerssent by the upstream reverse proxy. Necessary if the proxy handles +# SSL +#c.NotebookApp.trust_xheaders = False + +## Disable launching browser by redirect file +# +# For versions of notebook > 5.7.2, a security feature measure was added that +# prevented the authentication token used to launch the browser from being +# visible. This feature makes it difficult for other users on a multi-user +# system from running code in your Jupyter session as you. +# +# However, some environments (like Windows Subsystem for Linux (WSL) and +# Chromebooks), launching a browser using a redirect file can lead the browser +# failing to load. This is because of the difference in file structures/paths +# between the runtime and the browser. +# +# Disabling this setting to False will disable this behavior, allowing the +# browser to launch by using a URL and visible token (as before). +#c.NotebookApp.use_redirect_file = True + +## DEPRECATED, use tornado_settings +#c.NotebookApp.webapp_settings = {} + +## Specify Where to open the notebook on startup. This is the `new` argument +# passed to the standard library method `webbrowser.open`. The behaviour is not +# guaranteed, but depends on browser support. Valid values are: +# +# - 2 opens a new tab, +# - 1 opens a new window, +# - 0 opens in an existing window. +# +# See the `webbrowser.open` documentation for details. +#c.NotebookApp.webbrowser_open_new = 2 + +## Set the tornado compression options for websocket connections. +# +# This value will be returned from +# :meth:`WebSocketHandler.get_compression_options`. None (default) will disable +# compression. A dict (even an empty one) will enable compression. +# +# See the tornado docs for WebSocketHandler.get_compression_options for details. +#c.NotebookApp.websocket_compression_options = None + +## The base URL for websockets, if it differs from the HTTP server (hint: it +# almost certainly doesn't). +# +# Should be in the form of an HTTP origin: ws[s]://hostname[:port] +#c.NotebookApp.websocket_url = '' + +#------------------------------------------------------------------------------ +# ConnectionFileMixin(LoggingConfigurable) configuration +#------------------------------------------------------------------------------ + +## Mixin for configurable classes that work with connection files + +## JSON file in which to store connection info [default: kernel-.json] +# +# This file will contain the IP, ports, and authentication key needed to connect +# clients to this kernel. By default, this file will be created in the security +# dir of the current profile, but can be specified by absolute path. +#c.ConnectionFileMixin.connection_file = '' + +## set the control (ROUTER) port [default: random] +#c.ConnectionFileMixin.control_port = 0 + +## set the heartbeat port [default: random] +#c.ConnectionFileMixin.hb_port = 0 + +## set the iopub (PUB) port [default: random] +#c.ConnectionFileMixin.iopub_port = 0 + +## Set the kernel's IP address [default localhost]. If the IP address is +# something other than localhost, then Consoles on other machines will be able +# to connect to the Kernel, so be careful! +#c.ConnectionFileMixin.ip = '' + +## set the shell (ROUTER) port [default: random] +#c.ConnectionFileMixin.shell_port = 0 + +## set the stdin (ROUTER) port [default: random] +#c.ConnectionFileMixin.stdin_port = 0 + +## +#c.ConnectionFileMixin.transport = 'tcp' + +#------------------------------------------------------------------------------ +# KernelManager(ConnectionFileMixin) configuration +#------------------------------------------------------------------------------ + +## Manages a single kernel in a subprocess on this host. +# +# This version starts kernels with Popen. + +## Should we autorestart the kernel if it dies. +#c.KernelManager.autorestart = True + +## DEPRECATED: Use kernel_name instead. +# +# The Popen Command to launch the kernel. Override this if you have a custom +# kernel. If kernel_cmd is specified in a configuration file, Jupyter does not +# pass any arguments to the kernel, because it cannot make any assumptions about +# the arguments that the kernel understands. In particular, this means that the +# kernel does not receive the option --debug if it given on the Jupyter command +# line. +#c.KernelManager.kernel_cmd = [] + +## Time to wait for a kernel to terminate before killing it, in seconds. +#c.KernelManager.shutdown_wait_time = 5.0 + +#------------------------------------------------------------------------------ +# Session(Configurable) configuration +#------------------------------------------------------------------------------ + +## Object for handling serialization and sending of messages. +# +# The Session object handles building messages and sending them with ZMQ sockets +# or ZMQStream objects. Objects can communicate with each other over the +# network via Session objects, and only need to work with the dict-based IPython +# message spec. The Session will handle serialization/deserialization, security, +# and metadata. +# +# Sessions support configurable serialization via packer/unpacker traits, and +# signing with HMAC digests via the key/keyfile traits. +# +# Parameters ---------- +# +# debug : bool +# whether to trigger extra debugging statements +# packer/unpacker : str : 'json', 'pickle' or import_string +# importstrings for methods to serialize message parts. If just +# 'json' or 'pickle', predefined JSON and pickle packers will be used. +# Otherwise, the entire importstring must be used. +# +# The functions must accept at least valid JSON input, and output *bytes*. +# +# For example, to use msgpack: +# packer = 'msgpack.packb', unpacker='msgpack.unpackb' +# pack/unpack : callables +# You can also set the pack/unpack callables for serialization directly. +# session : bytes +# the ID of this Session object. The default is to generate a new UUID. +# username : unicode +# username added to message headers. The default is to ask the OS. +# key : bytes +# The key used to initialize an HMAC signature. If unset, messages +# will not be signed or checked. +# keyfile : filepath +# The file containing a key. If this is set, `key` will be initialized +# to the contents of the file. + +## Threshold (in bytes) beyond which an object's buffer should be extracted to +# avoid pickling. +#c.Session.buffer_threshold = 1024 + +## Whether to check PID to protect against calls after fork. +# +# This check can be disabled if fork-safety is handled elsewhere. +#c.Session.check_pid = True + +## Threshold (in bytes) beyond which a buffer should be sent without copying. +#c.Session.copy_threshold = 65536 + +## Debug output in the Session +#c.Session.debug = False + +## The maximum number of digests to remember. +# +# The digest history will be culled when it exceeds this value. +#c.Session.digest_history_size = 65536 + +## The maximum number of items for a container to be introspected for custom +# serialization. Containers larger than this are pickled outright. +#c.Session.item_threshold = 64 + +## execution key, for signing messages. +#c.Session.key = b'' + +## path to file containing execution key. +#c.Session.keyfile = '' + +## Metadata dictionary, which serves as the default top-level metadata dict for +# each message. +#c.Session.metadata = {} + +## The name of the packer for serializing messages. Should be one of 'json', +# 'pickle', or an import name for a custom callable serializer. +#c.Session.packer = 'json' + +## The UUID identifying this session. +#c.Session.session = '' + +## The digest scheme used to construct the message signatures. Must have the form +# 'hmac-HASH'. +#c.Session.signature_scheme = 'hmac-sha256' + +## The name of the unpacker for unserializing messages. Only used with custom +# functions for `packer`. +#c.Session.unpacker = 'json' + +## Username for the Session. Default is your system username. +#c.Session.username = 'hsv' + +#------------------------------------------------------------------------------ +# MultiKernelManager(LoggingConfigurable) configuration +#------------------------------------------------------------------------------ + +## A class for managing multiple kernels. + +## The name of the default kernel to start +#c.MultiKernelManager.default_kernel_name = 'python3' + +## The kernel manager class. This is configurable to allow subclassing of the +# KernelManager for customized behavior. +#c.MultiKernelManager.kernel_manager_class = 'jupyter_client.ioloop.IOLoopKernelManager' + +#------------------------------------------------------------------------------ +# MappingKernelManager(MultiKernelManager) configuration +#------------------------------------------------------------------------------ + +## A KernelManager that handles notebook mapping and HTTP error handling + +## White list of allowed kernel message types. When the list is empty, all +# message types are allowed. +#c.MappingKernelManager.allowed_message_types = [] + +## Whether messages from kernels whose frontends have disconnected should be +# buffered in-memory. +# +# When True (default), messages are buffered and replayed on reconnect, avoiding +# lost messages due to interrupted connectivity. +# +# Disable if long-running kernels will produce too much output while no +# frontends are connected. +#c.MappingKernelManager.buffer_offline_messages = True + +## Whether to consider culling kernels which are busy. Only effective if +# cull_idle_timeout > 0. +#c.MappingKernelManager.cull_busy = False + +## Whether to consider culling kernels which have one or more connections. Only +# effective if cull_idle_timeout > 0. +#c.MappingKernelManager.cull_connected = False + +## Timeout (in seconds) after which a kernel is considered idle and ready to be +# culled. Values of 0 or lower disable culling. Very short timeouts may result +# in kernels being culled for users with poor network connections. +#c.MappingKernelManager.cull_idle_timeout = 0 + +## The interval (in seconds) on which to check for idle kernels exceeding the +# cull timeout value. +#c.MappingKernelManager.cull_interval = 300 + +## Timeout for giving up on a kernel (in seconds). +# +# On starting and restarting kernels, we check whether the kernel is running and +# responsive by sending kernel_info_requests. This sets the timeout in seconds +# for how long the kernel can take before being presumed dead. This affects the +# MappingKernelManager (which handles kernel restarts) and the +# ZMQChannelsHandler (which handles the startup). +#c.MappingKernelManager.kernel_info_timeout = 60 + +## +#c.MappingKernelManager.root_dir = '' + +#------------------------------------------------------------------------------ +# KernelSpecManager(LoggingConfigurable) configuration +#------------------------------------------------------------------------------ + +## If there is no Python kernelspec registered and the IPython kernel is +# available, ensure it is added to the spec list. +#c.KernelSpecManager.ensure_native_kernel = True + +## The kernel spec class. This is configurable to allow subclassing of the +# KernelSpecManager for customized behavior. +#c.KernelSpecManager.kernel_spec_class = 'jupyter_client.kernelspec.KernelSpec' + +## Whitelist of allowed kernel names. +# +# By default, all installed kernels are allowed. +#c.KernelSpecManager.whitelist = set() + +#------------------------------------------------------------------------------ +# ContentsManager(LoggingConfigurable) configuration +#------------------------------------------------------------------------------ + +## Base class for serving files and directories. +# +# This serves any text or binary file, as well as directories, with special +# handling for JSON notebook documents. +# +# Most APIs take a path argument, which is always an API-style unicode path, and +# always refers to a directory. +# +# - unicode, not url-escaped +# - '/'-separated +# - leading and trailing '/' will be stripped +# - if unspecified, path defaults to '', +# indicating the root path. + +## Allow access to hidden files +#c.ContentsManager.allow_hidden = False + +## +#c.ContentsManager.checkpoints = None + +## +#c.ContentsManager.checkpoints_class = 'notebook.services.contents.checkpoints.Checkpoints' + +## +#c.ContentsManager.checkpoints_kwargs = {} + +## handler class to use when serving raw file requests. +# +# Default is a fallback that talks to the ContentsManager API, which may be +# inefficient, especially for large files. +# +# Local files-based ContentsManagers can use a StaticFileHandler subclass, which +# will be much more efficient. +# +# Access to these files should be Authenticated. +#c.ContentsManager.files_handler_class = 'notebook.files.handlers.FilesHandler' + +## Extra parameters to pass to files_handler_class. +# +# For example, StaticFileHandlers generally expect a `path` argument specifying +# the root directory from which to serve files. +#c.ContentsManager.files_handler_params = {} + +## Glob patterns to hide in file and directory listings. +#c.ContentsManager.hide_globs = ['__pycache__', '*.pyc', '*.pyo', '.DS_Store', '*.so', '*.dylib', '*~'] + +## Python callable or importstring thereof +# +# To be called on a contents model prior to save. +# +# This can be used to process the structure, such as removing notebook outputs +# or other side effects that should not be saved. +# +# It will be called as (all arguments passed by keyword):: +# +# hook(path=path, model=model, contents_manager=self) +# +# - model: the model to be saved. Includes file contents. +# Modifying this dict will affect the file that is stored. +# - path: the API path of the save destination +# - contents_manager: this ContentsManager instance +#c.ContentsManager.pre_save_hook = None + +## +#c.ContentsManager.root_dir = '/' + +## The base name used when creating untitled directories. +#c.ContentsManager.untitled_directory = 'Untitled Folder' + +## The base name used when creating untitled files. +#c.ContentsManager.untitled_file = 'untitled' + +## The base name used when creating untitled notebooks. +#c.ContentsManager.untitled_notebook = 'Untitled' + +#------------------------------------------------------------------------------ +# FileManagerMixin(Configurable) configuration +#------------------------------------------------------------------------------ + +## Mixin for ContentsAPI classes that interact with the filesystem. +# +# Provides facilities for reading, writing, and copying both notebooks and +# generic files. +# +# Shared by FileContentsManager and FileCheckpoints. +# +# Note ---- Classes using this mixin must provide the following attributes: +# +# root_dir : unicode +# A directory against against which API-style paths are to be resolved. +# +# log : logging.Logger + +## By default notebooks are saved on disk on a temporary file and then if +# successfully written, it replaces the old ones. This procedure, namely +# 'atomic_writing', causes some bugs on file system without operation order +# enforcement (like some networked fs). If set to False, the new notebook is +# written directly on the old one which could fail (eg: full filesystem or quota +# ) +#c.FileManagerMixin.use_atomic_writing = True + +#------------------------------------------------------------------------------ +# FileContentsManager(FileManagerMixin,ContentsManager) configuration +#------------------------------------------------------------------------------ + +## If True (default), deleting files will send them to the platform's +# trash/recycle bin, where they can be recovered. If False, deleting files +# really deletes them. +#c.FileContentsManager.delete_to_trash = True + +## Python callable or importstring thereof +# +# to be called on the path of a file just saved. +# +# This can be used to process the file on disk, such as converting the notebook +# to a script or HTML via nbconvert. +# +# It will be called as (all arguments passed by keyword):: +# +# hook(os_path=os_path, model=model, contents_manager=instance) +# +# - path: the filesystem path to the file just written - model: the model +# representing the file - contents_manager: this ContentsManager instance +#c.FileContentsManager.post_save_hook = None + +## +#c.FileContentsManager.root_dir = '' + +## DEPRECATED, use post_save_hook. Will be removed in Notebook 5.0 +#c.FileContentsManager.save_script = False + +#------------------------------------------------------------------------------ +# NotebookNotary(LoggingConfigurable) configuration +#------------------------------------------------------------------------------ + +## A class for computing and verifying notebook signatures. + +## The hashing algorithm used to sign notebooks. +#c.NotebookNotary.algorithm = 'sha256' + +## The sqlite file in which to store notebook signatures. By default, this will +# be in your Jupyter data directory. You can set it to ':memory:' to disable +# sqlite writing to the filesystem. +#c.NotebookNotary.db_file = '' + +## The secret key with which notebooks are signed. +#c.NotebookNotary.secret = b'' + +## The file where the secret key is stored. +#c.NotebookNotary.secret_file = '' + +## A callable returning the storage backend for notebook signatures. The default +# uses an SQLite database. +#c.NotebookNotary.store_factory = traitlets.Undefined + +#------------------------------------------------------------------------------ +# GatewayKernelManager(MappingKernelManager) configuration +#------------------------------------------------------------------------------ + +## Kernel manager that supports remote kernels hosted by Jupyter Kernel or +# Enterprise Gateway. + +#------------------------------------------------------------------------------ +# GatewayKernelSpecManager(KernelSpecManager) configuration +#------------------------------------------------------------------------------ + +#------------------------------------------------------------------------------ +# GatewayClient(SingletonConfigurable) configuration +#------------------------------------------------------------------------------ + +## This class manages the configuration. It's its own singleton class so that we +# can share these values across all objects. It also contains some helper methods +# to build request arguments out of the various config options. + +## The authorization token used in the HTTP headers. (JUPYTER_GATEWAY_AUTH_TOKEN +# env var) +#c.GatewayClient.auth_token = None + +## The filename of CA certificates or None to use defaults. +# (JUPYTER_GATEWAY_CA_CERTS env var) +#c.GatewayClient.ca_certs = None + +## The filename for client SSL certificate, if any. (JUPYTER_GATEWAY_CLIENT_CERT +# env var) +#c.GatewayClient.client_cert = None + +## The filename for client SSL key, if any. (JUPYTER_GATEWAY_CLIENT_KEY env var) +#c.GatewayClient.client_key = None + +## The time allowed for HTTP connection establishment with the Gateway server. +# (JUPYTER_GATEWAY_CONNECT_TIMEOUT env var) +#c.GatewayClient.connect_timeout = 60.0 + +## A comma-separated list of environment variable names that will be included, +# along with their values, in the kernel startup request. The corresponding +# `env_whitelist` configuration value must also be set on the Gateway server - +# since that configuration value indicates which environmental values to make +# available to the kernel. (JUPYTER_GATEWAY_ENV_WHITELIST env var) +#c.GatewayClient.env_whitelist = '' + +## Additional HTTP headers to pass on the request. This value will be converted +# to a dict. (JUPYTER_GATEWAY_HEADERS env var) +#c.GatewayClient.headers = '{}' + +## The password for HTTP authentication. (JUPYTER_GATEWAY_HTTP_PWD env var) +#c.GatewayClient.http_pwd = None + +## The username for HTTP authentication. (JUPYTER_GATEWAY_HTTP_USER env var) +#c.GatewayClient.http_user = None + +## The gateway API endpoint for accessing kernel resources +# (JUPYTER_GATEWAY_KERNELS_ENDPOINT env var) +#c.GatewayClient.kernels_endpoint = '/api/kernels' + +## The gateway API endpoint for accessing kernelspecs +# (JUPYTER_GATEWAY_KERNELSPECS_ENDPOINT env var) +#c.GatewayClient.kernelspecs_endpoint = '/api/kernelspecs' + +## The gateway endpoint for accessing kernelspecs resources +# (JUPYTER_GATEWAY_KERNELSPECS_RESOURCE_ENDPOINT env var) +#c.GatewayClient.kernelspecs_resource_endpoint = '/kernelspecs' + +## The time allowed for HTTP request completion. (JUPYTER_GATEWAY_REQUEST_TIMEOUT +# env var) +#c.GatewayClient.request_timeout = 60.0 + +## The url of the Kernel or Enterprise Gateway server where kernel specifications +# are defined and kernel management takes place. If defined, this Notebook +# server acts as a proxy for all kernel management and kernel specification +# retrieval. (JUPYTER_GATEWAY_URL env var) +#c.GatewayClient.url = None + +## For HTTPS requests, determines if server's certificate should be validated or +# not. (JUPYTER_GATEWAY_VALIDATE_CERT env var) +#c.GatewayClient.validate_cert = True + +## The websocket url of the Kernel or Enterprise Gateway server. If not +# provided, this value will correspond to the value of the Gateway url with 'ws' +# in place of 'http'. (JUPYTER_GATEWAY_WS_URL env var) +#c.GatewayClient.ws_url = None diff --git a/images/hub-jupyter/Dockerfile b/images/hub-jupyter/Dockerfile index 99e4263..21fa0e0 100644 --- a/images/hub-jupyter/Dockerfile +++ b/images/hub-jupyter/Dockerfile @@ -1,43 +1,40 @@ -FROM nvidia/cuda:10.1-cudnn7-runtime-centos8 +FROM nvidia/cuda:11.2.2-cudnn8-runtime-ubuntu20.04 ARG NB_USER="jovyan" USER root ENV DEBIAN_FRONTEND=noninteractive -RUN yum install -y \ - gcc gcc-c++ \ +RUN apt-get update && apt-get install -y \ + g++ \ nodejs \ python3.8 \ - python38-devel \ + python3-pip \ sudo \ + curl \ &&\ - curl https://copr.fedorainfracloud.org/coprs/vbatts/bazel/repo/epel-7/vbatts-bazel-epel-7.repo > /etc/yum.repos.d/vbatts-bazel-epel-7.repo &&\ - yum install -y bazel3 &&\ ln --force --symbolic /usr/bin/python3 /usr/bin/python &&\ pip3 install \ jupyterlab \ - nodejs \ pylint \ - tensorflow-gpu==2.3.0 \ - tensorboard==2.3.0 \ - tensorflow-probability==0.11.1 \ + tensorflow-gpu==2.7.0 \ + tensorboard==2.7.0 \ colored \ - ipywidgets \ matplotlib \ - plotly \ - bokeh \ seaborn \ scikit-learn \ scipy \ tqdm \ + networkx \ &&\ - jupyter labextension install @jupyter-widgets/jupyterlab-manager &&\ - adduser \ + curl -fsSL https://deb.nodesource.com/setup_17.x | bash - &&\ + apt-get install -y nodejs &&\ + jupyter labextension install @jupyter-widgets/jupyterlab-manager +RUN useradd \ --create-home \ --password "hashlife" \ --shell /usr/bin/bash \ --user-group \ - --groups wheel \ + --groups sudo \ $NB_USER &&\ echo "$NB_USER:hashlife" | chpasswd &&\ mkdir -p /data &&\ diff --git a/images/hub-jupyter/python-runtime.sh b/images/hub-jupyter/python-runtime.sh new file mode 100755 index 0000000..39a1b13 --- /dev/null +++ b/images/hub-jupyter/python-runtime.sh @@ -0,0 +1,8 @@ +#!/usr/bin/env bash + +docker run --rm -it \ + --volume "$PWD:/data" \ + --workdir "/data" \ + --entrypoint=$1 \ + hub-jupyter \ + ${@:2} diff --git a/images/latex/Dockerfile b/images/latex/Dockerfile index 280e561..7797cee 100644 --- a/images/latex/Dockerfile +++ b/images/latex/Dockerfile @@ -10,6 +10,9 @@ RUN apt-get update &&\ texlive-latex-extra \ texlive-extra-utils \ texlive-bibtex-extra \ + texlive-xetex \ biber \ make \ - latexmk + latexmk &&\ + apt-get install -y \ + fonts-sil-charis diff --git a/symlinks-bin.sh b/symlinks-bin.sh index ba68279..4e27c96 100755 --- a/symlinks-bin.sh +++ b/symlinks-bin.sh @@ -5,6 +5,7 @@ IMAGES=$PWD/images LOCAL_BIN=/usr/local/bin pushd $LOCAL_BIN >> /dev/null +ln -vs $IMAGES/hub-jupyter/python-runtime.sh . ln -vs $IMAGES/latex/latex-runtime.sh . ln -vs $IMAGES/latex/latexmk . ln -vs $IMAGES/latex/pdflatex .